GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLCA | trans | rs1056667 | 1 | rs6940188 | chr6:26562029 | ZNF322B | chr9:99957633-99961910:- | 0.47 | 8.29 | 1.87E-15 | Educational attainment |
| BLCA | trans | rs7230711 | 1 | rs7238856 | chr18:48746230 | SLC45A1 | chr1:8384390-8404226:+ | -0.6 | -6.39 | 4.95E-10 | Immune response to anthrax vaccine |
| BLCA | trans | rs10514688 | 1 | rs73061959 | chr3:34951800 | RXFP2 | chr13:32313679-32377008:+ | 0.34 | 5.96 | 5.84E-9 | Tonometry |
| BLCA | trans | rs853679 | 1 | rs735765 | chr6:28170297 | BTN3A2 | chr6:26365398-26378546:+ | -0.44 | -6.38 | 5.24E-10 | Depression |
| BLCA | trans | rs1056667 | 1 | rs767471 | chr6:26557854 | ZNF322B | chr9:99957633-99961910:- | 0.47 | 8.29 | 1.88E-15 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9295695 | chr6:26528250 | ZNF322B | chr9:99957633-99961910:- | -0.45 | -7.72 | 1.01E-13 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9357010 | chr6:26527945 | ZNF322B | chr9:99957633-99961910:- | 0.44 | 7.75 | 8.08E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9393728 | chr6:26509330 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.92 | 2.6E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9393729 | chr6:26514166 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.91 | 2.73E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9393731 | chr6:26529374 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.95 | 2.07E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9393732 | chr6:26530898 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.95 | 2.07E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9461259 | chr6:26504835 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.92 | 2.6E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9461271 | chr6:26554968 | ZNF322B | chr9:99957633-99961910:- | 0.47 | 8.29 | 1.88E-15 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9467773 | chr6:26498426 | ZNF322B | chr9:99957633-99961910:- | 0.46 | 8.03 | 1.23E-14 | Educational attainment |
| BLCA | trans | rs1056667 | 1 | rs9467774 | chr6:26505036 | ZNF322B | chr9:99957633-99961910:- | 0.45 | 7.92 | 2.6E-14 | Educational attainment |